API Documentation

gibbs

Perform Gibbs samplers and process data.

contacts

Create contact maps between two atom groups.

cluster

This module provides the ProcessProtein class, which collects and processes Gibbs sampler data.

kinetics

Map kinetics from gibbs data to md trajectory.

combine

Combine contact timeseries from multiple repeat runs.

util

Functions used by other modules.

cli

Command line functionality of basicrta.